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a fast splice junction mapper for RNA-Seq reads

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.

Version: 2.1.2 License: Boost-1 GitHub
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119 build(s) found

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Builder Build Number Start Time Elapsed Time Watcher Build Status
10.15 6740 2019-11-26 18:30:34 0:09:59 977 build successful
10.14 47104 2019-11-25 16:00:45 0:06:55 11469 build successful
10.6.x86_64 11200 2019-11-25 15:59:25 0:00:42 2181 failed install-dependencies
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10.7 10392 2019-11-25 15:53:55 0:01:28 2178 failed install-dependencies
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10.12 90899 2019-05-06 18:32:51 0:07:40 23260 build successful
10.10 86186 2019-05-06 18:11:25 0:06:04 24316 build successful
10.14 30276 2019-05-06 6:48:49 0:05:15 5946 build successful
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10.5_ppc 91754 2019-01-28 0:08:51 0:00:42 20917 failed install-dependencies
10.12 83469 2019-01-28 0:05:32 0:06:31 20631 build successful
10.13 48615 2019-01-28 0:03:57 0:07:02 12607 build successful